Bustamante's lab | QB3 Institute | UC Berkeley | UniPR
Software: Hot Zips

Name Hot Zips
Description

Contains several programs. TWEEZ13E.PAS is a Brownian dynamics simulation for the mechanical unzipping of a DNA hairpin molecule attached to a bead in an optical-trap.  See README.PDF for instructions.  HEATFLOW.PAS simulates the temperature rise caused by a heating-laser beam passing through a glass micro-chamber. See README2.PDF for instructions.  SEQ5C.PAS is useful for examining known basepair sequences.

File
File (1.5 Mb)
GENOME/ADENO2.TXT (45.0 Kb)
GENOME/lambda.txt (60.8 Kb) View
GENOME/pBAC.txt (9.9 Kb) View
GENOME/pbg11.txt (8.2 Kb) View
GENOME/phi29.txt (24.5 Kb) View
GENOME/pPIA2-6.txt (19.4 Kb) View
GENOME/RANDOM.TXT (10.1 Kb)
GENOME/revLAM.txt (60.8 Kb) View
GENOME/SV40.TXT (6.6 Kb)
GENOME/T7.TXT (50.1 Kb)
OUTPUT/QWERTY.BMP (0.2 Mb)
OUTPUT/QWERTY.TXT (60.5 Kb)
OUTPUT/QWERTY2.BMP (0.2 Mb)
OUTPUT/Trial.JPG (0.3 Mb)
OUTPUT/TRIAL.TXT (0.5 Mb)
OUTPUT/TRIAL1.TXT (0.5 Mb)
OUTPUT/TRIAL2.TXT (0.5 Mb)
Readme2.pdf (7.9 Kb) View
Readme.pdf (8.7 Kb) View
BINOBJ.EXE (10.0 Kb)
DPMIINST.EXE (35.9 Kb)
DPMILOAD.EXE (21.8 Kb)
GREP2MSG.EXE (3.9 Kb)
HEATFLOW.EXE (31.3 Kb)
MAKE.EXE (68.4 Kb)
PRNFLTR.EXE (6.7 Kb)
RTM.EXE (0.1 Mb)
RTMRES.EXE (7.8 Kb)
SEQ5C.EXE (28.9 Kb)
TEMC.EXE (56.4 Kb)
TPC.EXE (73.7 Kb)
TPUMOVER.EXE (9.5 Kb)
TPX.EXE (0.5 Mb)
TWEEZ13E.EXE (41.0 Kb)
WLC4.EXE (36.4 Kb)
ATT.BGI (6.1 Kb)
CGA.BGI (6.1 Kb)
EGAVGA.BGI (5.4 Kb)
HERC.BGI (6.0 Kb)
IBM8514.BGI (9.7 Kb)
PC3270.BGI (5.9 Kb)
VESA16.BGI (6.2 Kb)
BOLD.CHR (14.3 Kb)
EURO.CHR (8.2 Kb)
GOTH.CHR (17.6 Kb)
LCOM.CHR (11.8 Kb)
LITT.CHR (5.0 Kb)
SANS.CHR (13.3 Kb)
SCRI.CHR (10.7 Kb)
SIMP.CHR (8.2 Kb)
TRIP.CHR (16.3 Kb)
TSCR.CHR (16.9 Kb)
TPX.DSK (2.2 Kb)
TPX.ICO (0.7 Kb)
THELP.CFG (48 bytes)
TPC.CFG (13 bytes)
GREP.COM (6.9 Kb)
THELP.COM (10.8 Kb)
DPMI16BI.OVL (63.8 Kb)
BITMAP.PAS (2.4 Kb)
DISPLAY4.PAS (3.7 Kb)
FILESTFF.PAS (6.7 Kb)
HEATFLOW.PAS (7.4 Kb)
SEQ5C.PAS (7.0 Kb)
TWEEZ13E.PAS (9.1 Kb)
WLC4.PAS (3.2 Kb)
ZIPPER4F.PAS (3.2 Kb)
ZIPPER4G.PAS (3.2 Kb)
TPX.PSM (34.4 Kb)
TPX.PIF (0.5 Kb)
BRIEF.TEM (7.4 Kb)
DEFAULTS.TEM (8.5 Kb)
DOSEDIT.TEM (3.1 Kb)
EPSILON.TEM (7.9 Kb)
ENZYMES2.TXT (3.4 Kb)
FJCOLD.txt (24.2 Kb) View
XFJC.TXT (24.2 Kb)
TPX.TP (4.0 Kb)
TVISION.TPH (0.6 Mb)
-.TPL (5.5 Kb)
OLD.TPL (47.3 Kb)
TURBO.TPL (48.7 Kb)
ASYNC.TPU (23.3 Kb)
CRT.TPU (5.5 Kb)
GRAPH.TPU (32.7 Kb)
MOUSE.TPU (4.4 Kb)
TIMER.TPU (3.5 Kb)
Author Steve Smith
Email
last changed 2015/03/20 22:02

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